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A hap/sample set of files containing the Beagle4 haplotypes in Impute2 structure. These haplotypes are utilized as a starting point for your MCMC Utilized in SHAPEIT.
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This selection is usually recommended only In case you have a lot of persons as part of your dataset. Note that employing many threads bigger than the amount of out there cores will likely not additional lower the jogging occasions.
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This is required considering that phasing performs just one chromosome at a time, and therefore only involves the PIRs for a single chromsome at any given great post to read time.
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